Publications

A preliminary assessment of the article deduplication algorithm used for the OpenAIRE Research Graph. Kleanthis Vichos, Michele De Bonis, Ilias Kanellos, Serafeim Chatzopoulos, Claudio Atzori, Natalia Manola, Paolo Manghi, Thanasis Vergoulis. IRCDL 2022, 2022 

BIP! Scholar: A Service to Facilitate Fair Researcher Assessment. Thanasis Vergoulis, Serafeim Chatzopoulos, Kleanthis Vichos, Ilias Kanellos, Andrea Mannocci, Natalia Manola, Paolo Manghi. JCDL 2022, 2022 

A Cloud-Native NGS Data Processing and Annotation Platform. Giannis Mouchakis, Babis Kostopoulos, Stasinos Konstantopoulos, Ilias Kanellos, Anargiros Tzerefos, Thanasis Vergoulis, Thodoris Dalamagas. Poly/DMAH@VLDB 2021: 121-132, 2021

Simplifying Impact Prediction for Scientific Articles. Thanasis Vergoulis, Ilias Kanellos, Giorgos Giannopoulos, Theodore Dalamagas. EDBT/ICDT Workshops 2021, 2021 

Ranking Papers by their Short-Term Scientific Impact. Ilias Kanellos, Thanasis Vergoulis, Dimitris Sacharidis, Theodore Dalamagas, Yannis Vassiliou. ICDE 2021: 1997-2002, 2021

BIP! DB: A Dataset of Impact Measures for Scientific Publications. Thanasis Vergoulis, Ilias Kanellos, Claudio Atzori, Andrea Mannocci, Serafeim Chatzopoulos, Sandro La Bruzzo, Natalia Manola, Paolo Manghi. WWW (Companion Volume) 2021: 456-460, 2021 

ArtSim: Improved estimation of current impact for recent articles. Serafeim Chatzopoulos, Thanasis Vergoulis, Ilias Kanellos, Theodore Dalamagas, Christos Tryfonopoulos. AIMinScience 2020, 2020 

BIP! Finder: Facilitating scientific literature search by exploiting impact-based ranking. Thanasis Vergoulis, Serafeim Chatzopoulos, Ilias Kanellos, Panagiotis Deligiannis, Christos Tryfonopoulos, Theodore Dalamagas. CIKM 2019, 2019 

A study on the readability of scientific publications. Thanasis Vergoulis, Ilias Kanellos, Anargiros Tzerefos, Serafeim Chatzopoulos, Theodore Dalamagas, Spiros Skiadopoulos. TPDL 2019, 2019 

SciTo trends: visualising scientific topic trends. Serafeim Chatzopoulos, Panagiotis Deligiannis, Thanasis Vergoulis, Ilias Kanellos, Christos Tryfonopoulos, Theodore Dalamagas. TPDL 2019, 2019 

MirPub v2: Towards Ranking and Refining miRNA Publication Search Results. Ilias Kanellos, Vasiliki Vlachokyriakou, Thanasis Vergoulis, Georgios Georgakilas, Yannis Vassiliou, Artemis K. Hatzigeorgiou, Theodore Dalamagas. TPDL 15, 2015 

TarMiner: automatic extraction of miRNA targets from literature. Rodothea-Myrsini Tsoupidi, Ilias Kanellos, Thanasis Vergoulis, Ioannis S Vlachos, Artemis G Hatzigeorgiou, Theodore Dalamagas. SSDBM 2015, article No 12, 2015 

MR-microT: A MapReduce-based MicroRNA Target Prediction Method. Ilias Kanellos, Thanasis Vergoulis, Dimitris Sacharidis, Theodore Dalamagas, Artemis Hatzigeorgiou, Stelios Sartzetakis, Timos Sellis. SSDBM ’14, Article No. 47, 2014 

Further improvements on estimating the popularity of recently published papers. Serafeim Chatzopoulos, Thanasis Vergoulis, Ilias Kanellos, Theodore Dalamagas, Christos Tryfonopoulos. Quant. Sci. Stud. 2(4): 1529-1550, 2021 

BIP4COVID19: Releasing impact measures for articles relevant to COVID-19. Thanasis Vergoulis, Ilias Kanellos, Serafeim Chatzopoulos, Danae Pla Karidi, Theodore Dalamagas. Quant. Sci. Stud. 2(4): 1447-1465, 2021 

Impact-Based Ranking of Scientific Publications: A Survey and Experimental Evaluation. Ilias Kanellos, Thanasis Vergoulis, Dimitris Sacharidis, Theodore Dalamagas, Yannis Vassiliou. TKDE, DOI: 10.1109/TKDE.2019.2941206 (early access), 2019 

DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions. Karagkouni D, Paraskevopoulou MD, Chatzopoulos S, Vlachos IS, Tastsoglou S, Kanellos I, Papadimitriou D, Kavakiotis I, Maniou S, Skoufos G, Vergoulis T, Dalamagas T, Hatzigeorgiou AG. Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141. Epub 201 November 16, 2017 

DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators. Georgios Georgakilas, Ioannis S. Vlachos, Konstantinos Zagganas, Thanasis Vergoulis, Maria D. Paraskevopoulou, Ilias Kanellos, Panayiotis Tsanakas, Dimitris Dellis, Athanasios Fevgas, Theodore Dalamagas, Artemis G. Hatzigeorgiou. Nucl. Acids Res. 44 (D1): D190-D195, 2016 

DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts. Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis Hatzigeorgiou. Nucl. Acids Res. 44 (D1): D231-D238, 2016 

DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions. Ioannis S. Vlachos, Maria D. Paraskevopoulou, Dimitra Karagkouni, Georgios Georgakilas, Thanasis Vergoulis, Ilias Kanellos, Ioannis-Laertis Anastasopoulos, Sofia Maniou, Konstantina Karathanou, Despina Kalfakakou, Athanasios Fevgas, Theodore Dalamaga. Nucl. Acids Res. 43 (D1): D153-D159, 2015 

mirPub: a database for searching microRNA publications. Thanasis Vergoulis, Ilias Kanellos, Nikos Kostoulas, Georgios Georgakilas, Timos Sellis, Artemis Hatzigeorgiou, Theodore Dalamagas. Bioinformatics 31 (9): 1502-1504, 2014 

BIP4COVID19: Releasing impact measures forarticles relevant to COVID-19. Thanasis Vergoulis, Ilias Kanellos, Serafeim Chatzopoulos, Danae Pla Karidi, Theodore Dalamagas. bioRxiv 2020.04.11.037093; doi: https://doi.org/10.1101/2020.04.11.037093, 2020 

Μέθοδοι Κατάταξης και Μετρικές Απήχησης Επιστημονικών Δημοσιεύσεων. Ηλίας Κανέλλος. National Technical University of Athens, Greece, 2020 

Υλοποίηση μηχανισμού κατάταξης δημοσιεύσεων σχετικών με βιομόρια micro-RNA. Βασιλική Βλαχοκυριάκου. Department of Informatics and Telecommunications, National and Kapodistrian University of Athens, Greece, 2015